protein_sequence_similarity_search
Find homologous protein sequences from a query sequence using MMseqs2 (fast, ColabFold web API) or BLAST (comprehensive, EBI). Use when the user provides a protein sequence or FASTA file and wants homologs, function inference by sequence similarity, or input for an MSA. Do NOT use for structural similarity (use foldseek) or DNA/RNA queries.
What is this resource?
Find homologous protein sequences from a query sequence using MMseqs2 (fast, ColabFold web API) or BLAST (comprehensive, EBI). Use when the user provides a protein sequence or FASTA file and wants homologs, function inference by sequence similarity, or input for an MSA. Do NOT use for structural similarity (use foldseek) or DNA/RNA queries.
Review the original project for installation steps, licenses, compatibility and updates. This directory provides discovery links, not downloadable or verified code.
Installation
For repositories supported by the Skills CLI, you can typically start with:
npx skills add ai4protein/VenusFactory2Check the repository instructions and select the intended skill before installing. This command may not apply to every source.
Safety & attribution
This is an external resource, not independently security-audited by this directory. Inspect permissions, scripts and changes before using it with your files or accounts.