foldseek
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot BLAST. For structure prediction, use chai or boltz.
What is this resource?
Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot BLAST. For structure prediction, use chai or boltz.
Review the original project for installation steps, licenses, compatibility and updates. This directory provides discovery links, not downloadable or verified code.
Installation
For repositories supported by the Skills CLI, you can typically start with:
npx skills add adaptyvbio/protein-design-skillsCheck the repository instructions and select the intended skill before installing. This command may not apply to every source.
Safety & attribution
This is an external resource, not independently security-audited by this directory. Inspect permissions, scripts and changes before using it with your files or accounts.