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batch-effect-correction

Use when correcting batch effects in merged bulk expression matrices with sample-level batch metadata while preserving biological group structure and generating before-and-after QC plots. NOT for: single-cell integration, raw FASTQ processing, differential expression without batch labels, or datasets without biological groups.

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What is this resource?

Use when correcting batch effects in merged bulk expression matrices with sample-level batch metadata while preserving biological group structure and generating before-and-after QC plots. NOT for: single-cell integration, raw FASTQ processing, differential expression without batch labels, or datasets without biological groups.

Review the original project for installation steps, licenses, compatibility and updates. This directory provides discovery links, not downloadable or verified code.

Installation

For repositories supported by the Skills CLI, you can typically start with:

npx skills add aipoch/medical-research-skills

Check the repository instructions and select the intended skill before installing. This command may not apply to every source.

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